PROTEIN PENGIKAT AKTIN DAN PERANANNYA DALAM ORAGNISASI AKTIN FILAMEN -
Tuesday, November 29, 2011
PROTEIN PENGIKAT AKTIN DAN PERANANNYA DALAM ORAGNISASI AKTIN FILAMEN -
Saturday, November 26, 2011
(student project) Peran Mikrotubule dalam pembelahan sel, transport intrasel dan sel lokomosi
Peran Mikrotubule dalam pembelahan sel, transport intra sel dan sel lokomosi -student project -
Posted in 2011 , block the cell , microtubule , sitoskeleton , student project
Tuesday, November 15, 2011
Actin Binding Protein (ABP)
A large number of ABPs have been identified ( recently 162 proteins). No doubt more will be identified. Many of the known ABPs bind to the same loci on the surface of actin. A few bind with positive cooperativity and tend to form ternary complexes but rather more bind with negative cooperativity. In myofibrils, at least eight sarcomeric proteins bind to the thin filaments. At least 12 ABPs are membrane-associated proteins, and another nine are membrane receptors or ion transporters. Thirteen ABPs cross-link actin filaments, whereas others enable filaments to interact with other elements of the cytoskeleton. Microfilaments probably do not interact directly with microtubules and/or intermediate filaments but do so via linker proteins.
ABPs can be classified into seven groups.
- Monomer-binding proteins sequester G-actin and prevent its polymerization (e.g., thymosin β4, DNase I).
- Filament-depolymerizing proteins induce the conversion of F- to G-actin (e.g., CapZ and cofilin).
- Filament end-binding proteins cap the ends of the actin filament preventing the exchange of monomers at the pointed end (e.g., tropomodulin) and at the barbed end (e.g., CapZ).
- Filament severing proteins shorten the average length of filaments by binding to the side of F-actin and cutting it into two pieces (e.g., gelsolin).
- Cross-linking proteins contain at least two binding sites for F-actin, thus facilitating the formation of filament bundles, branching filaments, and three-dimensional networks (e.g., Arp2/3).
- Stabilizing proteins bind to the sides of actin filaments and prevent depolymerization (e.g., tropomyosin).
- Motor proteins that use F-actin as a track upon which to move (e.g., the myosin family of motors).
ABPs are not limited to one class, for example, gelsolin is capable of severing and capping the barbed end of actin filaments, and the Arp2/3 complex can nucleate filament formation, elongate filaments, and establish branch points in actin networks
Refferences
http://physrev.physiology.org
http://jcs.biologists.org
Posted in actin , actin binding protein , actin filament , cytoskeleton
Tuesday, November 8, 2011
The Cytoskeleton : Intermediate Filament
Ultrastructural and immunocytochemical investigations reveal that a third major filamentous structure is present in eukaryotic cells. In addition to the thin (actin) and thick (myosin) filaments, cells contain a class of intermediate-sized filaments with an average diameter of 10–12 nm. Several proteins that form intermediate filaments have been isolated and localized by immunocytochemical means.
Keratins (Gr. keras, horn) are a family of approximately 20 proteins found in epithelia. They are encoded by a family of genes and have different chemical and immunological properties. This diversity of keratin is related to the various roles these proteins play in the epidermis, nails, hooves, horns, feathers, scales, and the like that provide animals with defense against abrasion and loss of water and heat.
Vimentin filaments are characteristic of cells of mesenchymal origin. (Mesenchyme is an embryonic tissue.) Vimentin is a single protein (56–58 kDa) and may copolymerize with desmin or glial fibrillary acidic protein.
Desmin (skeletin) is found in smooth muscle and in the Z disks of skeletal and cardiac muscle (53–55 kDa).
Glial filaments (glial fibrillary acidic protein) are characteristic of astrocytes but are not found in neurons, muscle, mesenchymal cells, or epithelia (51 kDa).
Neurofilaments consist of at least three high-molecular-weight polypeptides (68, 140, and 210 kDa). Intermediate filament proteins have different chemical structures and different roles in cellular function.
Posted in cytoskeleton , intermediate filament
The Cytoskeleton : Actin Filament
Within cells, microfilaments can be organized in many forms.
1. In skeletal muscle, they assume a paracrystalline array integrated with thick (16-nm) myosin filaments.
2. In most cells, actin filaments form a thin sheath just beneath the plasmalemma, called the cell cortex. These filaments appear to be associated with membrane activities such as endocytosis, exocytosis, and cell migratory activity.
3. Actin filaments are intimately associated with several cytoplasmic organelles, vesicles, and granules. The filaments are believed to play a role in moving and shifting cytoplasmic components (cytoplasmic streaming).
4. Actin filaments are associated with myosin and form a "purse-string" ring of filaments whose constriction results in the cleavage of mitotic cells.
5. In most cells, actin filaments are found scattered in what appears to be an unorganized fashion within the cytoplasm.
Although actin filaments in muscle cells are structurally stable, in nonmuscle cells they readily dissociate and reassemble. Actin filament polymerization appears to be under the direct control of minute changes in Ca2+ and cyclic AMP levels. A large number of actin-binding proteins have been demonstrated in a wide variety of cells, and much current research is focused on how these proteins regulate the state of polymerization and lateral aggregation of actin filaments. Their importance can be deduced from the fact that only about half the cell's actin is in the form of filaments.
Presumably, most actin filament-related activities depend upon the interaction of myosin with actin.
Posted in actin filament , cytoskeleton
The Cytoskeleton : Microtubule
Microtubules
Within the cytoplasmic matrix of eukaryotic cells are tubular structures known as microtubules. Microtubules are also found in cytoplasmic processes called cilia and flagella. They have an outer diameter of 24 nm, consisting of a dense wall 5 nm thick and a hollow core 14 nm wide. Microtubules are variable in length, and individual tubules can attain lengths of several micrometers.
The subunit of a microtubule is a heterodimer composed of and tubulin molecules of closely related amino acid composition, each with a molecular mass of about 50 kDa.
Under appropriate conditions (in vivo or in vitro), tubulin subunits polymerize to form microtubules. With special staining procedures, tubulin can be seen as heterodimers organized into a spiral. A total of 13 units is present in one complete turn of the spiral.
Polymerization of tubulins to form microtubules in vivo is directed by a variety of structures collectively known as microtubule-organizing centers. These structures include cilia, basal bodies, and centrosomes. Microtubule growth, via subunit polymerization, occurs more rapidly at one end of existing microtubules. This end is referred to as the plus (+) end, and the other extremity is the minus (–) end. Tubulin polymerization is under control of the concentration of Ca2+ and of the microtubule-associated proteins, or MAPs. Microtubule stability is variable; for example, microtubules of cilia are stable, whereas microtubules of the mitotic spindle have a short duration. The antimitotic alkaloid colchicine binds specifically to tubulin, and when the complex tubulin–colchicine binds to microtubules, it prevents the addition of more tubulin in the plus (+) extremity. Mitotic microtubules are broken down because the depolymerization continues, mainly at the minus (–) end, and the lost tubulin units are not replaced.
Another alkaloid that interferes with the mitotic microtubule is taxol, which accelerates the formation of microtubules but at the same time stabilizes them. All cytosolic tubulin is used in stable microtubules, and no tubulin is left for the formation of the mitotic spindle. Another alkaloid, vinblastine, acts by depolymerizing formed microtubules and, in a second step, aggregating to form paracrystalline arrays of tubulin.
Cytoplasmic microtubules are stiff structures that play a significant role in the development and maintenance of cell shape. They are usually present in a proper orientation, either to effect development of a given cellular asymmetry or to maintain it. Procedures that disrupt microtubules result in the loss of this cellular asymmetry.
Microtubules also participate in the intracellular transport of organelles and vesicles. Examples include axoplasmic transport in neurons, melanin transport in pigment cells, chromosome movements by the mitotic spindle, and vesicle movements among different cell compartments. In each of these examples, movement is related to the presence of complex microtubule networks, and such activities are suspended if microtubules are disrupted. The transport guided by microtubules is under the control of special proteins called motor proteins, which use energy to move molecules and vesicles.
Microtubules provide the basis for several complex cytoplasmic components, including centrioles, basal bodies, cilia, and flagella. Centrioles are cylindrical structures (0.15 m in diameter and 0.3–0.5 m in length) composed primarily of short, highly organized microtubules. Each centriole shows nine sets of microtubules arranged in triplets. The microtubules are so close together that adjacent microtubules of a triplet share a common wall. Close to the nucleus of nondividing cells is a centrosome made of a pair of centrioles surrounded by a granular material. In each pair, the long axes of the centrioles are at right angles to each other. Before cell division, more specifically during the S period of the interphase, each centrosome duplicates itself so that now each centrosome has two pairs of centrioles. During mitosis, the centrosomes divide in two, move to opposite poles of the cell, and become organizing centers for the microtubules of the mitotic spindle.
Cilia and flagella (singular, cilium, flagellum) are motile processes, covered by cell membrane, with a highly organized microtubule core. Ciliated cells typically possess a large number of cilia, each about 2–3 m in length. Flagellated cells have only one flagellum, with a length close to 100 m. In humans, the spermatozoa are the only cell type with a flagellum. The main function of cilia is to sweep fluid from the surface of cell sheets. Both cilia and flagella possess the same core organization.
This core consists of nine pairs of microtubules surrounding two central microtubules. This sheaf of microtubules, possessing a 9 + 2 pattern, is called an axoneme (Gr. axon, axis, + nema, thread). Each of the nine peripheral pairs shares a common wall. The microtubules in the central pair are enclosed within a central sheath. Adjacent peripheral pairs are linked to each other by protein bridges called nexins and to the central sheath by radial spokes. The microtubules of each pair are identified as A and B. Microtubule A is complete, with 13 heterodimers, whereas B has only 10 heterodimers (in a cross section). Extending from the surface of microtubule A are pairs of arms formed by the protein dynein, which has ATPase activity.
At the base of each cilium or flagellum is a basal body, essentially similar to a centriole, that controls the assembly of the axoneme.
Posted in cytoskeleton , microtubule
Saturday, November 5, 2011
Microtubules, microfilaments & intermediate filaments
Microfilaments
Microfilaments are fine, thread-like protein fibers, 3-6 nm in diameter. They are composed predominantly of a contractile protein called actin, which is the most abundant cellular protein. Microfilaments' association with the protein myosin is responsible for muscle contraction. Microfilaments can also carry out cellular movements including gliding, contraction, and cytokinesis. |
Microtubules
Microtubules are cylindrical tubes, 20-25 nm in diameter. They are composed of subunits of the protein tubulin--these subunits are termed alpha and beta. Microtubules act as a scaffold to determine cell shape, and provide a set of "tracks" for cell organelles and vesicles to move on. Microtubules also form the spindle fibers for separating chromosomes during mitosis. When arranged in geometric patterns inside flagella and cilia, they are used for locomotion. |
Intermediate filaments are about 10 nm diameter and provide tensile strength for the cell. |
Posted in actin , cytoskeleton , intermediate filament , microtubule
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(Student Project) Actin Binding Protein dan Perannya dalam Organisasi Filamen Aktin